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BINF 7193: Bioinformatics Graduate Seminar
Course resources
Seminar series for Fall 2009
Attendance of one lecture per week at UALR or UAMS, along with the completion of the evaluation form in a week, are the criteria for BINF 7193, a requirement for all Bioinformatics graduate students starting Fall 2009. The following table lists some, but not all, of the approved lectures for this course. The numbered columns in the first table represent a seminar series at UALR or UAMS. The second table lists more information about the location and time of a seminar series. Contact Dr. Steven Jennings for additional information about recommended lectures.
Date 1 2 3 4 5 6 7 8 9 10 Speaker Title
Wednesday,
Jun. 03rd
12:00 PM-1:00 PM
X Chris Hackler, PhD
Director, Division of Medical Humanities
D. Micah Hester, PhD
Associate Director, Division of Medical HumanitiesAssociate Professor of Medical Humanities and Pediatrics

UAMS
"Selected Issues in Clinical Research Ethics"
Friday,
Jun. 05th
12:00 PM-1:00 PM
X Shimul Chowdhury


"A genome-wide association study identifies protein quantitative trait loci (pQTLs)."
Friday,
Jun. 05th
12:00 PM-1:00 PM
X William Hogan
MD, MS

Director, Medical Vocabulary Services
Associate Professor of Biomedical Informatics
University of Pittsburgh
"Rembrandt or stick figures? The state of the art of representation in Biomedical Informatics"
Wednesday,
Jun. 10th
10:00am
X Dr. Volker Kruft
Manager of Business Development in Proteomics Mass Spectrometry Systems (EMEA)
Applied Biosystems
"Use of mass spectrometry for the verification/validation of protein and peptide biomarkers"
Wednesday,
Jun. 17th
12:00 PM
X Laura F. Hutchins, MD
Professor of Medicine
Director, Division of Hematology/Oncology
Virginia Clinton Kelly Endowed Chair for Clinical Breast Cancer Research
UAMS
"Glioblastoma"
Wednesday,
Jul. 22nd
10:00-11:00am
X Sangeeta Khare, Ph.D
Research Assistant Professor, Department of Veterinary Pathobiology
College of Veterinary Medicine & Biomedical Sciences
Texas A&M University
"Emerging and Re-emerging Diseases of Mucosal Surface: A Systems Biology Analysis Approach to Discover Personalized Medicine"
Monday,
Aug. 31st
4-5pm
X Dr. Stephen Grace
Biology Department
UALR
"Polyphenol antioxidant production in tomato. What can we learn from leaves?"
Thursday,
Sep. 3nd
10:00am
X Dr. Soumitra Ghoshroy
Director, Electron Microscopy Center,
University of South Carolina,
Columbia, SC
"Application of Electron Microscopy in Research From Bio to Nano"
Wednesday,
Sep. 9th
12:00noon
X Deborah S. Davison, DNP, AOCNP
Senior Genomic Science Liaison
Genomic Health
"Oncotype DX: Targeting Tumor Biology"
Thursday,
Sep. 10nd
1:30 pm
X Brian Storrie, Ph.DProfessor
Department of Physiology and Biophysics
UAMS
"Putting the Golgi apparatus together:Do Rab proteins rule?"
Thursday,
Sep. 10nd
12:00noon
X Cody Cook "Tim17: maintaining the other 'human'genome"
Monday,
Sep. 14th
4:00pm
X Dr. Lirong Zeng,
Assistant professor,
UALR Biology Department
"Employing Model Plants Tomato And Rice To Study The Molecular Basis Underlying Plant-Microbe Interactions"
Monday,
Sep. 14th
12:00noon
X William D. O'Brien, PhDDonald Biggar Willett Professor of Engineering
Director, Bioacoustics Research Laboratory
Department of Electrical and Computer Engineering
University of Illinois at Urbana-Champaign
"Acoustic microstreaming considerations for sonothrombolysis and sonoporation"
Wednesday,
Sep. 16th
12:00noon
X Charles Falany, Ph.D.Professor of Pharmacology and Toxicology
University of Alabama Birmingham
"Human Cytosolic SULT2 isoforms: Distinct Properties in Hydroxysteroid Sulfation"
Thursday,
Sep. 17th
1:30pm
X Wayne Gray, Ph.D.Professor
Department of Microbiology and Immunology
UAMS
"Simian Varicella: a model to study the pathogenesis of chickenpox and shingles and to evaluate improved varicella vaccines"
Monday,
Sep. 21th
4-5pm
X Jing Zhang, Applied Science MS student "Construction of cyanobacterial mutants expressing the coumarate 3-hydroxylase from Arabidopsis"
Monday,
Sep. 21th
12:00noon
X Saraswati Sukumar, PhD
Professor of Oncology and Pathology
The Johns Hopkins University School of Medicine
Co-director, Breast Cancer Program
Department of Oncology
"New insights into HOX gene function in breast cancer and regulation by long non-coding RNAs"
Wednesday,
Sep. 23th
12:00noon
X Stephen Kron, M.D., Ph.D.Ludwig Center for Metastasis Research
The University of Chicago
"Chromatin dynamics at DNA double strand breaks"
Wednesday,
Sep. 23th
1:30pm
X Steven M. Schrader, Ph.D.Reproductive Health Assessment
NIOSH/CDC
Cinncinnati, Ohio
"Male Adolescent Exposure to ndocrine-Disrupting Pesticides"
Thursday,
Sep. 24th
4:00pm
X Tony M. Plant, Ph.D.Director, Center for Research in Reproductive Physiology
Magee-Women's Research Institute
University of Pittsburgh School of Medicine
Pittsburgh, PA
"The neurobiology of the onset of puberty in the monkey"
Monday,
Sep. 28th
4:00pm
X Krishna Kannan, Ph.D.Research Asst Professor
Dept of Internal Medicine/ Rheumatolgy
UAMS
"Where are we at finding a cure for Rheumatoid Arthritis?"
Thursday,
Sep. 24th
1:30pm
X Vladimir Lupashin, Ph.D.Department of Microbiology & Immunology
Associate Professor
Department of Physiology and Biophysics
University of Arkansas For Medical Sciences
"Role of the Conserved Oligomeric Golgi complex in intracellular trafficking of glycosylation enzymes and bacterial toxins."
Thursday,
Sep. 24th
12:00noon
X Endrit Ziu "Lrp5 Controls Bone Formation by Inhibing Serotonin Synthesis in the Duodenum"
Wednesday,
Sep. 30th
12:00noon
X Satya Kunapuli, Ph.D. Temple University School of Medicine
Department of Physiology
"Mechanisms of differential regulation of platelet functions by protein kinase C delta"
Thursday,
Oct. 1st
12:00noon
X Steven Eugene Smith "Switch-like Control of SREBP-2 Transport Triggered by Small Changes in ER Cholesterol: A Delicate Balance"
Friday,
Oct. 2nd
4:00pm
X Dr. Lirong ZengAssistant Professor in Biology Department,
UALR
"Employing Model Plants Tomato and Rice to Study the Molecular Mechanisms of Plant-Microbe Interactions "
Monday,
Oct. 5th
4:00pm
X Shimul Chowdhury, UAMS "Genetic and epigenetic alterations associated with congenital heart defects."
Wednesday,
Oct. 7th
12:00noon
X Sherri Smart "Regulation of transcriptional elongation through histone crosstalk"
Thursday,
Oct. 8th
12:00noon
X Ramanagouda R-Bhojappa "What happens when a DNA helicase (XPD) encounters stationary roadblock (SSBs)"
Thursday,
Oct. 8th
1:30pm
X Patricia Wight, Ph.D.Professor
Department of Physiology and Biophysics
University of Arkansas For Medical Sciences
"Understanding myelin gene regulation as a means to promote remyelination in MS patients"
Monday,
Oct. 12th
4:00pm
X Dr. Rakhee Agarwal, UAMS "Role of Inositol Polyphosphates in Programmed Cell Death"
Wednesday,
Oct. 14th
12:00
X Moshe Finel, Ph.D.University of Helsinki "UDP-Glucuronosyltransferases in Testosterone Abuse"
Thursday,
Oct. 15th
12:00
X Rebecca Gilbride "Synthetic Galectin-3 Inhibitor Increases Metastatic Cancer Cell Sensitivity to Taxol-Induced Apoptosis In Vitro and In Vivo"
Thursday,
Oct. 15th
1:30pm
X Joe Lutkenhaus, Ph.D. Molecular Genetics and Immunology
University of Kansas Medical Center
Kansas City, KS
"Regulation of Cell Division in E:coli by inhibitors of FtsZ"
Monday,
Oct. 19th
12:00noon
X Ralph D. Sanderson, PhDProfessor of Pathology
University of Alabama at Birmingham
"Targeting the heparan sulfate/heparanase axis for cancer therapy"
Friday,
Oct. 16th
3:00-4:00pm
X Dr. Henry DaniellPegasus Professor and University Board of Trustee Chair, College of Medicine,
University of Central Florida
"Production Biofuel Enzymes, Biopharmaceuticals and Vaccines in Plants"
Monday,
Oct. 19th
4:00pm
X Shelley Baird, UALR biology graduate student "Morphophysiological Indicators of Energetic Load According to Reproductive State in the Digestive Tracts of Mice and Rats"
Wednesday,
Oct. 21th
12:00noon
X John M. Abrams, Ph.D.
The University of Texas Southwestern Medical Center
Department of Cell Biology
"Programmed and Un-programmed Apoptosis in a Genetic Model"
Thursday,
Oct. 22th
12:00noon
X Kimberly A. Reynolds "Mechanochemical Removal of Ribosome Biogenesis Factors from Nascent 60A Ribosomal Subunits."
Monday,
Oct. 26th
4:00pm
X Ithay Biton, UALR biology graduate student "Functional Analysis of Two Novel Dictyostelium discoideum RABs"
Tuesday,
Oct. 27th
4:00pm
X Stephen Erickson, PHDAssistant Professor of Pediatrics and Biostatistics, UAMS
Statistical Geneticist,
Arkansas Center for Birth Defects Research and Prevention
"Microarray-based genotyping of DNA extracted from Subject-collected mail-in cheek swabs"
Wednesday,
Oct. 28th
12:00noon
X Stephen White, Ph.D.St. Jude Children's Research Hospital "Structural and functional studies on DNA repair:the phage T4 UvsXYW recombination system and tyrosyl-DNA phosphodiesterase"
Thursday,
Oct. 29th
3:00pm
X ROBERT P. SKOFF, Ph.D., ProfessorDepartment of Anatomy and Cell Biology
Wayne State University
School of Medicine Detroit, MI
"Myelin proteolipid protein mutations lead to global brain mitochondrial dysfunction and inflammation"
Wednesday,
Nov. 4th
10am
X Upasana T. Saini Doctoral Student-Division of Neurotoxicology
UALR/UAMS Joint Bioinformatics Program
"Gender-Specific Gene Expression Analysis and Cross-Mapping Differentially Expressed Genes to Specific Chromosomal Locations in the Male and Female Rat"
Wednesday,
Nov. 18th
12:00noon
X Yuzhi Chen, Ph. D.Assistant Professor,
Department of Geriatrics And Neurobiology and Developmental Sci.,
UAMS
"Gender-Specific Gene Expression Analysis and Cross-Mapping Differentially Expressed Genes to Specific Chromosomal Locations in the Male and Female Rat"
*Seminar Series
Ref Series Location Time
1 UALR Biosciences and Bioinformatics Seminar UALR
ETAS 230
Mondays
4-5pm
2 UALR CyberCollege/CSAM Colloquium UALR
FH 102
Fridays
3-4pm
3 UAMS Department of Biochemistry & Molecular Biology Seminar UAMS
Biomedical Research Center II
Rayford Auditorium Room 106-2
Wednesdays
12-1pm
4 Department of Microbiology & Immunology Seminar Series UAMS
Biomedical Research Center II
Rayford Auditorium Room 106-2
Thursdays
1:30pm
5 Cancer Institute Forum UAMS
"Winthrop P. Rockefeller Cancer Institute Sam Walton Auditorium, 10th Floor"
Monday
12:00 NOON
6 Departmant of Biostatictics UAMS
"COPH3202"
Monday
4:00 PM
7 College of Public Health Health Research UAMS
"College of Public Health Building 4301 W. Markham Room 2280"
Tuesday
4:00 PM
8 Webinar Online TBD
9 National Center for Toxicological Research NCTR
"Jefferson, Arkansas"
TBD
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